Ka Ks value calculation through TBTool #genomewidestudy

We use the TBTool to calculate the synonymous (ka) and nonsynonymous (ks) substitution rate and their ratio of duplicated genes in the family. Find the positive selection within the family genes.
How to calculate kaks value
Simplest method to calculate kaks value
Kaks value through tbtool
Easy way to find kaks value
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Rectangular phylogenetic tree
What is ka ks value
#genomewidestudy
#bioinformatics
#kaks

• #science_technology
• #tbtool
• #genome_wide_study
• #genome_wide_analysis
• #protein
• #synonymous_nonsynonymous
• #substitution_rate
• #ka_ks
• #ka_ks_ratio
• #pgdd
• #plant_genome_duplication_database
• #tbtool
• #divergence_time
• #gene_duplication
• #segmental_duplication
• #tendam
• #gene_family
• #million_years_ago
• #mya
• #positive_selection
• #negative_selection
• #gene_evolution
• #selection_pressure
• #evolutionary_analysis
• #cds_sequence
• #gene_link_information
• #gene_cds_sequence
• #clustalomega
• #pal2nal
• #pairwisealignment
• #alignment